GC Percent Track Settings

GC Percent in 5-Base Windows (All Mapping and Sequencing tracks)

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Type of graph:
Track height:	pixels (range: 16 to 128)
Data view scaling:	Always include zero:
Vertical viewing range:	min:	max: (range: 0 to 100)
Transform function:	Transform data points by:
Windowing function:		Smoothing window:	pixels
Negate values:
Draw y indicator lines:	at y = 0.0: at y =

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Description

The GC percent track shows the percentage of G (guanine) and C (cytosine) bases in 5-base windows on the 15 Mar 2023 Agelaius phoeniceus/GCF_020745825.1_Agelaius_phoeniceus_1.1/GCF_020745825.1 genome assembly. High GC content is typically associated with gene-rich areas. The average overall GC percent for the entire assembly is % 43.15.

This track may be configured in a variety of ways to highlight different aspects of the displayed information. Click the "Graph configuration help" link for an explanation of the configuration options.

Credits

The data and presentation of this graph were prepared by Hiram Clawson.