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Display chromosome ideogram above main graphic
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Configure Tracks on UCSC Genome Browser: bChiLan1.pri Jan. 2020 lance-tailed manakin (2020) (GCF_009829145.1)
  Tracks:    Groups:
Control track and group visibility more selectively below.
-   Mapping and Sequencing    
Base Position Chromosome position in bases. (Clicks here zoom in 3x)
All Gaps All gaps of unknown nucleotides (N's), including AGP annotated gaps
Assembly Assembly
GC Percent GC Percent in 5-Base Windows
Restr Enzymes Restriction Enzymes from REBASE
Short Match Perfect Matches to Short Sequence ()
Tandem Dups Paired identical sequences
-   Genes and Gene Predictions    
NCBI RefSeq RefSeq gene predictions from NCBI
Ensembl genes Ensembl genes 2020_11
Augustus Augustus Gene Predictions
TOGA vs. galGal6 TOGA annotations using chicken/galGal6 as reference
-   mRNA and EST    
RefSeq mRNAs RefSeq mRNAs mapped to this assembly
-   Expression and Regulation    
CpG Islands CpG Islands (Islands < 300 Bases are Light Green)
-   Comparative Genomics    
Mouse Chain/Net Mouse (Jun. 2020 (GRCm39/mm39)), Chain and Net Alignments
-   Variation and Repeats    
RepeatMasker Repeating Elements by RepeatMasker
RepeatModeler RepeatModeler Repetitive Elements
Simple Repeats Simple Tandem Repeats by TRF
WM + SDust Genomic Intervals Masked by WindowMasker + SDust